Files in bihealth/metaquac
Metabolomics Targeted Quality Control
.Rbuildignore
.gitignore
DESCRIPTION
HISTORY.md
LICENSE
NAMESPACE
R/analysis_overview.R
R/exclusion.R
R/global_data.R
R/helper.R
R/import_checks.R
R/import_generic_tables.R
R/import_metidq_tables.R
R/imputation.R
R/metadata.R
R/nested_execution.R
R/normalization.R
R/pca.R
R/preprocessing.R
R/profiles.R
R/qc_compound_variability.R
R/qc_general.R
R/qc_heatmap.R
R/qc_missing_values.R
R/qc_position.R
R/qc_replicates.R
R/qc_sequence_variability.R
R/report_creation.R
R/rsd.R
R/testing.R
README.md
dev/development.R
inst/extdata/biocrates_p400_test_01/Batch1_FIA1.txt
inst/extdata/biocrates_p400_test_01/Batch1_FIA2.txt
inst/extdata/biocrates_p400_test_01/Batch1_LC1.txt
inst/extdata/biocrates_p400_test_01/Batch1_LC2.txt
inst/extdata/biocrates_p400_test_01/Batch2_FIA1.txt
inst/extdata/biocrates_p400_test_01/Batch2_FIA2.txt
inst/extdata/biocrates_p400_test_01/Batch2_LC1.txt
inst/extdata/biocrates_p400_test_01/Batch2_LC2.txt
inst/extdata/biocrates_p400_test_01/Batch3_FIA1.txt
inst/extdata/biocrates_p400_test_01/Batch3_FIA2.txt
inst/extdata/biocrates_p400_test_01/Batch3_LC1.txt
inst/extdata/biocrates_p400_test_01/Batch3_LC2.txt
inst/extdata/biocrates_q500_test_01/Batch1_FIA.txt
inst/extdata/biocrates_q500_test_01/Batch1_LC.txt
inst/extdata/biocrates_q500_test_01/extra_annotation.txt
inst/extdata/generic_test_01/random_matrix_area.tsv
inst/extdata/generic_test_01/random_matrix_conc.tsv
inst/extdata/generic_test_02/random_matrix_area_batch1.tsv
inst/extdata/generic_test_02/random_matrix_area_batch2.tsv
inst/extdata/generic_test_02/random_matrix_conc_batch1.tsv
inst/extdata/generic_test_02/random_matrix_conc_batch2.tsv
inst/extdata/generic_test_03/Batch1_area.csv
inst/extdata/generic_test_03/Batch1_conc.csv
inst/extdata/generic_test_03/Batch1_status.csv
inst/resources/P400_table.csv
inst/resources/Q500_urine_limits.csv
inst/resources/metidq_export.png
inst/rmd/main.Rmd
inst/rmd/nbc_calibration_scatter.Rmd
inst/rmd/nbc_data_restructuring.Rmd
inst/rmd/nbc_import_biocrates.Rmd
inst/rmd/nbc_import_generic.Rmd
inst/rmd/nbc_import_info.Rmd
inst/rmd/nbc_metadata.Rmd
inst/rmd/nbc_misc_add_figures.Rmd
inst/rmd/nbc_misc_environment.Rmd
inst/rmd/nbc_misc_export.Rmd
inst/rmd/nbc_misc_low_concentration.Rmd
inst/rmd/nbc_misc_low_concentration_fia.Rmd
inst/rmd/nbc_misc_low_concentration_lc.Rmd
inst/rmd/nbc_multivariate_visualization.Rmd
inst/rmd/nbc_overview_profiling.Rmd
inst/rmd/nbc_preprocessing.Rmd
inst/rmd/nbc_qc.Rmd
inst/rmd/nbc_qc_compound_variability.Rmd
inst/rmd/nbc_qc_rsd.Rmd
inst/rmd/nbc_setup.Rmd
inst/testdata/datasets/data_generic_test_03_org.RData
inst/testdata/datasets/data_p400_test_01_LC_org.RData
man/create_qc_report.Rd
metaquac.Rproj
tests/testthat.R
tests/testthat/test_processing_status.R
tests/testthat/test_report.R
