makeExampleData: make an example multi-view data set for illustration of MOFA

In bioFAM/MOFA: Multi-Omics Factor Analysis (MOFA)

Description

Function to simulate an example multi-view data set according to the generative model of MOFA.

Usage

makeExampleData(n_views = 3, n_features = 100, n_samples = 50,
  n_factors = 5, likelihood = "gaussian")

Arguments

n_views	number of views
n_features	number of features in each view
n_samples	number of samples
n_factors	number of factors
likelihood	likelihood for each view, one of "gaussian", "bernoulli", "poisson", or a character vector of length n_views

Value

Returns an untrained MOFAmodel containing simulated data as training data.

Examples

# Generate a data set
MOFAexample <- makeExampleData()
str(MOFAexample)

bioFAM/MOFA documentation built on Oct. 3, 2020, 12:53 a.m.