bioinformatic-seragnoli/BOBaFIT: Refitting diploid region profiles using a clustering procedure
This package provides a method to refit and correct the diploid region in copy number profiles. It uses a clustering algorithm to identify pathology-specific normal (diploid) chromosomes and then use their copy number signal to refit the whole profile. The package is composed by three functions: DRrefit (the main function), ComputeNormalChromosome and PlotCluster.
Getting started
Browse package contents
Package details |
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|---|---|
| Bioconductor views | Clustering CopyNumberVariation Normalization Software Visualization |
| Maintainer | |
| License | GPL (>= 3) |
| Version | 1.0.1 |
| URL | https://github.com/andrea-poletti-unibo/BOBaFIT |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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