read_one_scanBam: Read one element of the result of sanBam function from...
In biomedscience/hCIRC: biocomputational tools for computational biology
View source: R/HostGeneCount.R
Description
Read one element of the result of sanBam function from Rsamtools. This function Called by read_scanBam.
Usage
1
read_one_scanBam(scanBam_one_result, strand = "+", splicedOnly = TRUE)
Arguments
scanBam_one_result
one element of the sanBam result, corresponding to one genomic region.
strand
of the region, "+", "-" or "*".
splicedOnly
Only count reads that are spliced at the circRNA junction. Default to be TRUE.
biomedscience/hCIRC documentation built on Dec. 19, 2021, 9:47 a.m.
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View source: R/HostGeneCount.R
Description
Read one element of the result of sanBam function from Rsamtools. This function Called by read_scanBam.
Usage
1 | read_one_scanBam(scanBam_one_result, strand = "+", splicedOnly = TRUE)
|
Arguments
scanBam_one_result |
one element of the sanBam result, corresponding to one genomic region. |
strand |
of the region, "+", "-" or "*". |
splicedOnly |
Only count reads that are spliced at the circRNA junction. Default to be TRUE. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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