RDataXMan-package: RDataXMan: Data Extraction Management

Description Details

Description

There are 5 functions in this package.

Details

Functions genInclusion, genVariable and extract_data are the 3 main functions that generates inclusion criteria and variable lists based on target databases, and extract subset of data for user.

Functions initWkdir and initResearchFolder are helper functions to set working directory and subfolders for specific data requests.

RDataXMan Software Requirements for Apple Mac Computers

For installation of the software on Apple computers running OS X please follow the steps before attempting to install RDataXMan

  1. Install the latest version of Oracle Java JDK from https://www.oracle.com/technetwork/java/javase/downloads/index.html

  2. Open the terminal and type the following commands:

    • sudo R CMD javareconf -n

    • sudo ln -s $(/usr/libexec/java_home)/jre/lib/server/libjvm.dylib /usr/local/lib

  3. Install package rJava from CRAN


biostatUniBS/RDataXMan documentation built on Feb. 2, 2021, 9:41 a.m.