tcgas: The Cancer Genome Atlas's Study of Head and Neck Squamous...
In bips-hb/DataTrainCausalLearning: Practicals for the Data Train Course "Causal learning" 2021 (V Didelez)
tcgas R Documentation
The Cancer Genome Atlas's Study of Head and Neck Squamous Cell Carcinoma
Description
The Cancer Genome Atlas (TCGA, https://www.cancer.gov/tcga), a landmark cancer
genomics program, molecularly characterized over 20,000 primary cancer and
matched normal samples spanning 33 cancer types.
Usage
data(tcgas)
data(tcgadisc)
Format
A data frame with 362 observations on the following 8 variables:
- BAX
a numeric or discretized vector
- CDKN2A
a numeric or discretized vector
- CDKN1A
a numeric or discretized vector
- HMGA2
a numeric or discretized vector
- MDM2
a numeric or discretized vector
- SERPINE1
a numeric or discretized vector
- THBS1
a numeric or discretized vector
- CDK6
a numeric or discretized vector
Source
https://portal.gdc.cancer.gov/projects/TCGA-HNSC
References
The Cancer Genome Atlas Network. Comprehensive genomic
characterization of head and neck squamous cell carcinomas. Nature 517, 576–582 (2015).
bips-hb/DataTrainCausalLearning documentation built on Dec. 5, 2023, 8:32 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| tcgas | R Documentation |
The Cancer Genome Atlas's Study of Head and Neck Squamous Cell Carcinoma
Description
The Cancer Genome Atlas (TCGA, https://www.cancer.gov/tcga), a landmark cancer genomics program, molecularly characterized over 20,000 primary cancer and matched normal samples spanning 33 cancer types.
Usage
data(tcgas)
data(tcgadisc)
Format
A data frame with 362 observations on the following 8 variables:
- BAX
a numeric or discretized vector
- CDKN2A
a numeric or discretized vector
- CDKN1A
a numeric or discretized vector
- HMGA2
a numeric or discretized vector
- MDM2
a numeric or discretized vector
- SERPINE1
a numeric or discretized vector
- THBS1
a numeric or discretized vector
- CDK6
a numeric or discretized vector
Source
https://portal.gdc.cancer.gov/projects/TCGA-HNSC
References
The Cancer Genome Atlas Network. Comprehensive genomic characterization of head and neck squamous cell carcinomas. Nature 517, 576–582 (2015).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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