R package to extract relevant time series of ILI from retrospective HES Data
Package contains functions for: 1.Loading HES data and extracting the relevant fields. 2.Filtering data by ICD code. 3.Creating time series of weekly hospital admissions, which can optionally be organised by user-specified age bracket and/or hospital trust.
Still to incorporate: Functions for creating weekly time series of other outcomes (deaths, pneumonia, ventilation).
devtools::install_github('https://github.com/bjeffrey92/HESDataExtracter')
See demo/extractHESData.R
for example script
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