PracticeUserInput: A practice dataset that includes RNAseq data from a purified...

In blaquez/BrainInABlender2K: Estimates Cell Type Balance in Brain Cortical Samples Using Microarray or RNAseq Data

Description

This dataset contains RNAseq data from a purified single cell type experiment. Prior to usage, the data were log-transformed (base 2). Details can be found in: Zhang Y, Chen K, Sloan SA, Bennett ML, Scholze AR, O’Keeffe S, et al. An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex. J Neurosci Off J Soc Neurosci. 2014 Sep 3;34(36):11929–47.

Usage

PracticeUserInput

Format

A data frame with 22462 rows and 18 variables:

Mouse Gene Symbol

The broadest category for the cell type where this gene was found to be specifically expressed

A1

The counts for the first sample of astrocytes

A2

The counts for the second sample of astrocytes

Source

https://sites.google.com/a/umich.edu/megan-hastings-hagenauer/

blaquez/BrainInABlender2K documentation built on Sept. 17, 2020, 12:04 a.m.