View source: R/GetAlgoParams.R
GetAlgoParams | R Documentation |
Get control parameters for optim_SQGDE function.
GetAlgoParams(
n_params,
n_particles = NULL,
n_diff = 2,
n_iter = 1000,
init_sd = 0.01,
init_center = 0,
n_cores_use = 1,
step_size = NULL,
jitter_size = 1e-06,
crossover_rate = 1,
parallel_type = "none",
return_trace = FALSE,
thin = 1,
purify = Inf,
adapt_scheme = NULL,
give_up_init = 100,
stop_check = 10,
stop_tol = 1e-04,
converge_crit = "stdev"
)
n_params |
The number of parameters estimated/optimized, this integer value NEEDS to be specified. |
n_particles |
The number of particles (population size), 3*n_params is the default value. |
n_diff |
The number of mutually exclusive vector pairs to stochastically approximate the gradient. |
n_iter |
The number of iterations to run the algorithm, 1000 is default. |
init_sd |
A positive scalar or n_params-dimensional numeric vector, determines the standard deviation of the Gaussian initialization distribution. The default value is 0.01. |
init_center |
A scalar or n_params-dimensional numeric vector, determines the mean of the Gaussian initialization distribution. The default value is 0. |
n_cores_use |
An integer specifying the number of cores used when using parallelization. The default value is 1. |
step_size |
A positive scalar, jump size or "F" in the DE crossover step notation. The default value is 2.38/sqrt(2*n_params). |
jitter_size |
A positive scalar that determines the jitter (noise) size. Noise is added during adaption step from Uniform(-jitter_size,jitter_size) distribution. 1e-6 is the default value. Set to 0 to turn off jitter. |
crossover_rate |
A numeric scalar on the interval (0,1]. Determines the probability a parameter on a chain is updated on a given crossover step, sampled from a Bernoulli distribution. The default value is 1. |
parallel_type |
A string specifying parallelization type. 'none','FORK', or 'PSOCK' are valid values. 'none' is default value. 'FORK' does not work with Windows OS. |
return_trace |
A boolean, if true, the function returns particle trajectories. This is helpful for assessing convergence or debugging model code. The trace will be an iteration/thin $x$ n_particles $x$ n_params array containing parameter values and an iteration/thin $x$ n_particles array containing particle weights. |
thin |
A positive integer. Only every 'thin'-th iteration will be stored in memory. The default value is 1. Increasing thin will reduce the memory required when running the algorithim for longer. |
purify |
A positive integer. On every 'purify'-th iteration the particle weights are recomputed. This is useful if the objective function is stochastic/noisy. If the objective function is deterministic, this computation is redundant. Purify is set to Inf by default, disabling it. |
adapt_scheme |
A string that must be 'rand','current', or 'best' that determines the DE adaption scheme/strategy. 'rand' uses rand/1/bin DE-like scheme where a random particle and the particle-based quasi-gradient approximation are used to generate proposal updates for a given particle. 'current' uses current/1/bin, and 'best' uses best/1/bin which follow an analogous adaption scheme to rand. 'rand' is the default value. |
give_up_init |
An integer for how many failed initialization attempts before stopping the optimization routine. 100 is the default value. |
stop_check |
An integer for how often to check the convergence criterion. The default is 10 iterations. |
stop_tol |
A convergence metric must be less than value to be labeled as converged. The default is 1e-4. |
converge_crit |
A string denoting the convergence metric used, valid metrics are 'stdev' (standard deviation of population weight in the last stop_check iterations) and 'percent' (percent improvement in median particle weight in the last stop_check iterations). 'stdev' is the default. |
A list of control parameters for the optim_SQGDE function.
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