get_coverage_matrix: Extract coverage matrix from vcf object
In bobverity/missdiva: Missing Data Imputation Via ARIMA
Description
Extract coverage matrix, i.e. the "DP" element, from vcf object.
Usage
1
get_coverage_matrix(file = NULL, vcf = NULL, verbose = TRUE)
Arguments
file
path to vcf file.
vcf
object of class vcfR.
verbose
if reading from file, whether to read in verbose manner.
bobverity/missdiva documentation built on May 28, 2019, 1:18 p.m.
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Description
Extract coverage matrix, i.e. the "DP" element, from vcf object.
Usage
1 | get_coverage_matrix(file = NULL, vcf = NULL, verbose = TRUE)
|
Arguments
file |
path to vcf file. |
vcf |
object of class |
verbose |
if reading from file, whether to read in verbose manner. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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