space_time_plot: A space-time plot.

In bocinsky/gutaker2020: Research Compendium for Gutaker et al. 2020 thermal niche model

Description

Given a raster brick (and possibly uncertainties/errors), plot a map of the average across time, and a graph of the average across space.

Usage

space_time_plot(
  the_brick,
  the_brick_upper = NULL,
  the_brick_lower = NULL,
  out_file,
  line = 75,
  title = NULL,
  time,
  timelim,
  timeaxis,
  timelab = "Year AD",
  zbreaks = NULL,
  zlab,
  zaxis,
  zcolors = rev(RColorBrewer::brewer.pal(11, "RdYlBu")),
  fig_width = 6.5,
  graph_height = 1.5,
  margin = 0.1,
  pt_size = 8,
  smooth = FALSE,
  extra_plot_fun = NULL,
  extra_legend_fun = NULL
)

Arguments

the_brick	The data to plot
the_brick_upper	The upper CI data
the_brick_lower	The lower CI data
out_file	Where to write the output
title	The Title of the plot
time	The timeseries of the plot
timelim	The time limits of the plot
timeaxis	The time limits of the axis
timelab	The label of the time axis
zbreaks	The color breaks for plotting
zlab	The label for the data
zaxis	The axis breaks for the data
zcolors	The colors for the data
fig_width	The width of the figure
graph_height	The height of the time series graph
margin	The margin
pt_size	The point size
smooth	Should the timeseries be smoothed by kernel estimation
extra_plot_fun	Any extra plotting functions
extra_legend_fun	Any extra legend functions

bocinsky/gutaker2020 documentation built on Sept. 25, 2020, 3:10 a.m.