Files in bodkan/admixr
An Interface for Running 'ADMIXTOOLS' Analyses
.Rbuildignore
.binder/apt.txt
.binder/postBuild
.binder/runtime.txt
.covrignore
.gitattributes
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
Makefile
NAMESPACE
NEWS.md
R/config_files.R
R/eigenstrat.R
R/io.R
R/log.R
R/output_parsers.R
R/qpAdm.R
R/utils.R
R/wrappers.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
admixr.Rproj
cran-comments.md
docs/404.html
docs/LICENSE-text.html
docs/LICENSE.html
docs/articles/index.html
docs/articles/qpAdm.html
docs/articles/qpAdm_files/figure-html/qpAdm_fig1-1.png
docs/articles/qpAdm_files/figure-html/qpAdm_fig2-1.png
docs/articles/tutorial.html
docs/articles/tutorial_files/figure-html/d_plot-1.png
docs/articles/tutorial_files/figure-html/f3_plot-1.png
docs/articles/tutorial_files/figure-html/f4ratio_plot-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/count_snps.html
docs/reference/download_data.html
docs/reference/eigenstrat.html
docs/reference/f4ratio.html
docs/reference/filter_bed.html
docs/reference/index.html
docs/reference/keep_transitions.html
docs/reference/loginfo.html
docs/reference/merge_eigenstrat.html
docs/reference/pipe.html
docs/reference/print.EIGENSTRAT.html
docs/reference/print.admixr_result.html
docs/reference/qpAdm.html
docs/reference/qpAdm_filter.html
docs/reference/qpAdm_rotation.html
docs/reference/qpWave.html
docs/reference/read_ind.html
docs/reference/read_output.html
docs/reference/relabel.html
docs/reference/reset.html
docs/reference/transversions_only.html
docs/reference/write_ind.html
docs/sitemap.xml
man/count_snps.Rd
man/download_data.Rd
man/eigenstrat.Rd
man/f4ratio.Rd
man/filter_bed.Rd
man/keep_transitions.Rd
man/loginfo.Rd
man/merge_eigenstrat.Rd
man/pipe.Rd
man/print.EIGENSTRAT.Rd
man/print.admixr_result.Rd
man/qpAdm.Rd
man/qpAdm_filter.Rd
man/qpAdm_rotation.Rd
man/qpWave.Rd
man/read_ind.Rd
man/read_output.Rd
man/relabel.Rd
man/reset.Rd
man/transversions_only.Rd
man/write_ind.Rd
tests/testthat.R
tests/testthat/admixtools_presence.R
tests/testthat/helper-functions.R
tests/testthat/test-admixtools_cmds.R
tests/testthat/test-filtering.R
tests/testthat/test-io.R
tests/testthat/test-log.R
tests/testthat/test-qpAdm.R
tests/testthat/test-utils.R
tests/testthat/test-wrappers.R
vignettes/bioinformatics.csl
vignettes/library.bib
vignettes/qpAdm.Rmd
vignettes/tutorial.Rmd
