ts_vcf: Save genotypes from the tree sequence as a VCF file
In bodkan/spannr: A Simulation Framework for Spatiotemporal Population Genetics
ts_vcf R Documentation
Save genotypes from the tree sequence as a VCF file
Description
Save genotypes from the tree sequence as a VCF file
Usage
ts_vcf(ts, path, chrom = NULL, individuals = NULL)
Arguments
ts
Tree sequence object of the class slendr_ts
path
Path to a VCF file
chrom
Chromosome name to be written in the CHROM column of the VCF
individuals
A character vector of individuals in the tree sequence. If
missing, all individuals present in the tree sequence will be saved.
Value
No return value, called for side effects
bodkan/spannr documentation built on Dec. 19, 2024, 11:43 p.m.
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| ts_vcf | R Documentation |
Save genotypes from the tree sequence as a VCF file
Description
Save genotypes from the tree sequence as a VCF file
Usage
ts_vcf(ts, path, chrom = NULL, individuals = NULL)
Arguments
ts |
Tree sequence object of the class |
path |
Path to a VCF file |
chrom |
Chromosome name to be written in the CHROM column of the VCF |
individuals |
A character vector of individuals in the tree sequence. If missing, all individuals present in the tree sequence will be saved. |
Value
No return value, called for side effects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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