SES: Standard Event System on 100 pig embryo

In bomarkussen/clusterMultinomial: Hierarchical clustering of multinomial data

Description

Collected by Kristian Kamstrup

Usage

data("SES")

Format

A data frame with 100 observations on the following 26 variables.

Sow

a factor with sow id

Embryo

a factor with pig id

Carnegie.stage

Carnegie stage

dpi

days post insamination

GL

greatest length

Neural tube

a factor with levels Primitive streak Neural folds closure Anterior neuropore closed Neuropores closed

Somites

a factor with levels 6-10 pairs 11-15 pairs 16-20 pairs 21-25 pairs 26-30 pairs 31-35 pairs 36-40 pairs 41-45 pairs 46-50 pairs >50 pairs

Head

a factor with levels Head bulbus Anterior cephalic projection Head projection disappeared

Nose

a factor with levels Olfactory pit External nares

Ear

a factor with levels Otic pit Otic vesicle Pinna fold

Eye

a factor with levels Optic vesicle Lens vesicle Optic fissure Contour lens/iris Pupil forms

Ribs

a factor with levels Rib primordia

Heart

a factor with levels Ventricle bulbus Thoracal bulbus disappeared Ventricle:liver 50:50 Liver biggest

Tail

a factor with levels Tail bud Tail

Forelimbs

a factor with levels Ridge Bud Elongated Apical Ectodamal Ridge Elbow Paddle Digital plate

Hindlimbs

a factor with levels Apical Ectodamal Ridge Paddle Digital plate

Maxillary process

a factor with levels Bud Posterior eye Midline eye Anterior lens Anterior eye Frontonasal fuse

Mandibular process

a factor with levels Arch bud Posterior eye Posterior lens Midline eye Anterior lens Anterior eye Level frontonasal Occlusion point Insisur

Pharyngeal arches

a factor with levels 2nd arch 3rd arch 4th arch

Pharyngeal slits

a factor with levels 1st slit 2nd slit 3rd slit Slits closed

Neck

a factor with levels Cervical flexure 90? Cervical flexure disappeared 45? angle

Eye lids

a factor with levels Lower lid Begun overgrow Ventral lens Dorsal and ventral lens

Forefoot

a factor with levels Digital grooves Digital serration Finger

CS

a factor with levels Cervical sinus

Mammary line

a factor with levels Posterior ear Mid ear Anterior ear 1/3 from ear to eye 2/3 from ear to eye Posterior eye Mid eye

Hindfoot

a factor with levels Digital serration Finger

References

Kristians PhD Thesis

Examples

data(SES)
plot(GL~dpi,col=Sow,data=SES)

bomarkussen/clusterMultinomial documentation built on May 4, 2019, 6:39 p.m.