Files in bonStats/smcdar

Delayed-acceptance SMC

LICENSE.md R/DA-conservative-DAMH.R R/DA-memoised-log-likelihood-interface.R R/DA-required-MH-steps.R R/DA-run-smc-da.R R/DA-select-best-tuning-params.R R/DA-standard-MH.R R/RcppExports.R R/annealing-schedule.R R/eve-variance.R R/helper.R R/lotka-volterra-ctmc.R R/lotka-volterra-lna.R R/mvn-jitter.R R/particle-apply.R R/particles-dim.R R/particles-object.R R/particles-shape.R R/resampling.R R/robust-cluster-cov.R R/simulate-ctmc.R R/smcdar-package.R README.md analysis/biased-normal-surrogate/simulation-biased-normal-surrogate.R analysis/lotka-volterra/README.md analysis/lotka-volterra/lotka-volterra-ctmc-smc-da.R analysis/lotka-volterra/lotka-volterra-example.R analysis/lotka-volterra/lotka-volterra-testing.R analysis/lotka-volterra/sim-lotka-volterra.R analysis/lotka-volterra/sim-lotka-volterra2.R analysis/whittle-likelihood/whittle-likelihood-example.R man/d_dt_lotka_volterra_lna.Rd man/ess.Rd man/eve-set.Rd man/eve.Rd man/eve.particles.Rd man/eve_var_est.Rd man/generator_matrix_lotka_volterra_ctmc.Rd man/log_geometric_anneal_func.Rd man/log_lhood_lotka_volterra_ctmc.Rd man/log_lhood_lotka_volterra_lna.Rd man/log_likelihood_anneal_func.Rd man/log_likelihood_anneal_func_da.Rd man/mh_da_step_bglr.Rd man/mh_step.Rd man/min_da_mh_cost.Rd man/min_mh_cost.Rd man/mvn_jitter.Rd man/names.particles.Rd man/num_particles.Rd man/p_components.Rd man/p_dim.Rd man/p_shape.Rd man/papply.Rd man/particles.Rd man/print.particles.Rd man/replace_particles.Rd man/resample_multinomial.Rd man/resample_stratified.Rd man/robust_mean_cov.Rd man/run_smc_da.Rd man/select_reweight_particles.Rd man/simulate_ctmc.Rd man/simulate_lotka_volterra_ctmc.Rd man/smcdar.Rd man/time_steps_to_min_quantile_dist_bootstrap.Rd man/time_steps_to_min_quantile_dist_emp.Rd man/time_steps_to_min_quantile_dist_gamma.Rd man/time_steps_to_min_quantile_dist_median.Rd man/time_steps_to_min_quantile_dist_normal.Rd man/weights-set-.particles.Rd man/weights-set.Rd man/weights.particles.Rd tests/testthat.R tests/testthat/test-particle-construct-access.R