ProjectSummary: Constructor for ProjectSummary

In booker-tremayne/new-prideR: Explore the Pride Archive in R

Description

Constructor for ProjectSummary

Usage

ProjectSummary(
  accession,
  project.title,
  project.description,
  sample.processing.protocol,
  data.processing.protocol,
  publication.date,
  organisms,
  organism.parts,
  diseases,
  identified.ptm.strings,
  instruments,
  quantification.methods,
  project.tags,
  submission.type,
  lab.PIs,
  submitters,
  affiliations
)

Arguments

accession	project accession
project.title	the title of the project
project.description	the description of the project
sample.processing.protocol	the protocol that was used to gather the data
data.processing.protocol	the protocol that was used to process the data
publication.date	the date when the project was made public by PRIDE
organisms	the organisms of the project
organism.parts	the organism.parts of the project
diseases	the diseases of the project
identified.ptm.strings	the names of the PTM for the project
instruments	the names of the instruments used in the project
quantification.methods	the quantification methods of the project
project.tags	the tags for the project
submission.type	the type of the submission, e.g. COMPLETE, PARTIAL or PRIDE
lab.PIs	the principal investigators of the project
submitters	the person/people who submitted the project
affiliations	the groups the "lab.PIs" and "submitters" are affiliated with

booker-tremayne/new-prideR documentation built on Dec. 19, 2021, 10:48 a.m.