NEWS.md

In boupetch/rsleep: Analysis of Sleep Data

rsleep 1.0.12

• DOI: 10.5281/zenodo.10507974
• Added detect_rem() to detect rapid eye movements, implemented from Agarwal & Al, 2005.
• Added detect_apneic_events() to detect apneic events from oximetry signal, implemented from Jung & Al, 2018.
• Set default startTime to 2000-01-01 in read_events_compumedics().
• Added new publications using the rsleep package
• NULL epochs are not removed anymore in the epochs function.
• Making sure the package build and test can run without an internet connection.

rsleep 1.0.11

• Added create_xts() function to create xts objects from signal.
• Added clean_oximetry() function to remove oximetry signals outliers.
• Added a CONTRIBUTING.md file.
• Updated read_events_compumedics() to take labels bindings as parameter.
• Added Spindles detection and analysis vignette.
• Added bandpass() function as it is useful.
• Added a7() implemented from Lacourse & Al 2019.

rsleep 1.0.10

• Added adanorm() implemented from Choi & Al 2018.
• Added balanced accuracy custom metric to deep learning model.
• Corrected 302 link to PsyArxiv.

rsleep 1.0.9

• Removed 302 link to Resmed website.
• Updated rsleep.org certificates.

rsleep 1.0.8

• Added NREM to transitions() included stages.
• Corrected SleepCycles directory lifecycle to stick to CRAN guidelines.
• epochs() padding use empty matrixes when padding exceed signal boundaries.

rsleep 1.0.7

• periods() function returns a dataframe of sleep periods from a hypnogram, continuous or splitted by stages.
• transitions() function now use a format parameter to return a vector, a dataframe or a plot of counted transitions.
• Added segmentation() function to split signals into consecutive overlapping (or not) chunks.
• Added ckappa() to compute Cohen's Kappa, a coefficient of agreement for nominal scales.
• Added choi2018() function, a Keras implementation of the deep learning architecture described by Choi & Al in "Real-time apnea-hypopnea event detection during sleep by convolutional neural network".
• read_events_profusion() bug in scored events reading fixed.
• plot_hypnogram() can take colors to use as a parameter.
• Added read_events_ndb() function to read .ndb files from Resmed Noxturnal software.
• Added plot_event() function to plot a scored event over a signal.

rsleep 1.0.6

• Following efforts towards merge between Github and CRAN versions.
• Renamed read_stages_compumedics function to read_events_compumedics.
• Added read_events_profusion function to read annotations from NSRR.
• Added xml2 package to dependencies.
• Added tst90 function.
• hypnogram function can now take hypnodensity to convert to hypnogram and plot it if asked with the plot parameter.
• Added transitions function to compute matrices of stages transitions.

rsleep 1.0.5

• This release adds a few functions already available in the devel version on Github.

rsleep 1.0.2

• epochs function can take a single vector containing a single signal. resample default to the max of the sample rates.
• Added padding parameter to epochs function. Pads epochs with previous and next epochs of the record.
• bands_power renamed to bands_psd.
• bands_psd does not normalize by band size anymore.
• In bands_psd, broadband argument renamed to normalize. Can be set up to FALSE.
• Spectral analysis & File management vignettes.
• Write function write_mdf & write_channel use platform endian by default to write binary files.
• Added automatic sleep staging functions and vignette.
• Added read_stages_compumedics() and write_hypnogram_compumedics() functions.
• Removed examples example_ecg_200hz and example_hypnogram_30s.
• Added smooth_hypnogram() and smooth_liang2012()

boupetch/rsleep documentation built on March 15, 2024, 5:44 p.m.