Files in boyuren158/GP-CERF
Gaussian Processes for Estimating Causal Exposure Response Curves

.Rbuildignore
.covrignore
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
CITATION.cff
CODE_OF_CONDUCT.md CONTRIBUTING.md
DESCRIPTION
GPCERF.Rproj
LICENSE.md
NAMESPACE
NEWS.md R/RcppExports.R R/compute_deriv_nn.R R/compute_deriv_weights_gp.R R/compute_inverse.R R/compute_m_sigma.R R/compute_posterior_m_nn.R R/compute_posterior_sd_nn.R R/compute_rl_deriv_gp.R R/compute_rl_deriv_nn.R R/compute_sd_gp.R R/compute_w_corr.R R/compute_weight_gp.R R/estimate_cerf_gp.R R/estimate_cerf_nngp.R R/estimate_gps.R R/estimate_mean_sd_nn.R R/estimate_noise_gp.R R/estimate_noise_nn.R R/find_optimal_nn.R R/generate_synthetic_data.R R/gpcerf_package.R R/plot.R R/print.R R/set_logger.R R/utils.R R/zzz.R README.md
_pkgdown.yml
cran-comments.md
docker_singularity/Dockerfile
docker_singularity/README.md
docs/404.html
docs/CODE_OF_CONDUCT.html
docs/LICENSE.html
docs/articles/A-Note-on-Choosing-Hyperparameters.html
docs/articles/Developers-Guide.html
docs/articles/Full-Gaussian-Processes.html
docs/articles/Full-Gaussian-Processes_files/figure-html/unnamed-chunk-4-1.png
docs/articles/Full-Gaussian-Processes_files/figure-html/unnamed-chunk-4-2.png
docs/articles/Full-Gaussian-Processes_files/figure-html/unnamed-chunk-5-1.png
docs/articles/Full-Gaussian-Processes_files/figure-html/unnamed-chunk-5-2.png
docs/articles/GPCERF.html
docs/articles/GPCERF_files/figure-html/unnamed-chunk-5-1.png
docs/articles/GPCERF_files/figure-html/unnamed-chunk-6-1.png
docs/articles/Nearest-neighbor-Gaussian-Processes.html
docs/articles/Nearest-neighbor-Gaussian-Processes_files/figure-html/unnamed-chunk-5-1.png
docs/articles/Nearest-neighbor-Gaussian-Processes_files/figure-html/unnamed-chunk-5-2.png
docs/articles/Nearest-neighbor-Gaussian-Processes_files/figure-html/unnamed-chunk-6-1.png
docs/articles/Nearest-neighbor-Gaussian-Processes_files/figure-html/unnamed-chunk-6-2.png
docs/articles/Standard-Gaussian-Processes.html
docs/articles/Standard-Gaussian-Processes_files/figure-html/unnamed-chunk-4-1.png
docs/articles/Standard-Gaussian-Processes_files/figure-html/unnamed-chunk-5-1.png
docs/articles/index.html
docs/authors.html
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.0/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.0/bootstrap.min.css
docs/deps/bootstrap-5.1.3/bootstrap.bundle.min.js
docs/deps/bootstrap-5.1.3/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.1.3/bootstrap.min.css
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js
docs/deps/bootstrap-5.2.2/bootstrap.bundle.min.js.map
docs/deps/bootstrap-5.2.2/bootstrap.min.css
docs/deps/data-deps.txt
docs/deps/jquery-3.6.0/jquery-3.6.0.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.js
docs/deps/jquery-3.6.0/jquery-3.6.0.min.map
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/GPCERF-package.html
docs/reference/Rplot001.png
docs/reference/autoplot.cerf_gp.html
docs/reference/autoplot.cerf_nngp.html
docs/reference/calc_ac.html
docs/reference/compute_deriv_nn.html
docs/reference/compute_deriv_weights_gp.html
docs/reference/compute_inverse.html
docs/reference/compute_m_sigma.html
docs/reference/compute_posterior_m_nn.html
docs/reference/compute_posterior_sd_nn.html
docs/reference/compute_rl_deriv_gp.html
docs/reference/compute_rl_deriv_nn.html
docs/reference/compute_sd_gp.html
docs/reference/compute_w_corr.html
docs/reference/compute_weight_gp.html
docs/reference/estimate_cerf_gp.html
docs/reference/estimate_cerf_nngp.html
docs/reference/estimate_gps.html
docs/reference/estimate_mean_sd_nn.html
docs/reference/estimate_noise_gp.html
docs/reference/estimate_noise_nn.html
docs/reference/figures/ai/gpcerf_logo.ai
docs/reference/figures/png/gpcerf_logo.png
docs/reference/figures/png/readme_gp.png
docs/reference/figures/png/readme_nngp.png
docs/reference/find_optimal_nn.html
docs/reference/generate_synthetic_data.html
docs/reference/get_logger.html
docs/reference/index.html
docs/reference/log_system_info.html
docs/reference/plot.cerf_gp.html
docs/reference/plot.cerf_nngp.html
docs/reference/print.cerf_gp.html
docs/reference/print.cerf_nngp.html
docs/reference/set_logger.html
docs/reference/summary.cerf_gp.html
docs/reference/summary.cerf_nngp.html
docs/reference/train_GPS.html
docs/search.json
docs/sitemap.xml
functional_tests/paper_runs/README.md functional_tests/paper_runs/figure_1.R functional_tests/paper_runs/figure_2.R functional_tests/paper_runs/figure_3_data_compute_runtime_gp_vs_nngp.R functional_tests/paper_runs/figure_3_plot_runtime_gp_vs_nngp.R functional_tests/paper_runs/figure_4_data_performance_variable_neighbor.R functional_tests/paper_runs/figure_4_plot_performance_variable_neighbor.R
functional_tests/paper_runs/runtime_data_gp_vs_nngp.txt
functional_tests/paper_runs/runtime_data_var_nn_2.txt
index.md
inst/CITATION
man/GPCERF-package.Rd man/autoplot.cerf_gp.Rd man/autoplot.cerf_nngp.Rd man/compute_deriv_nn.Rd man/compute_deriv_weights_gp.Rd man/compute_inverse.Rd man/compute_m_sigma.Rd man/compute_posterior_m_nn.Rd man/compute_posterior_sd_nn.Rd man/compute_rl_deriv_gp.Rd man/compute_rl_deriv_nn.Rd man/compute_sd_gp.Rd man/compute_w_corr.Rd man/compute_weight_gp.Rd man/estimate_cerf_gp.Rd man/estimate_cerf_nngp.Rd man/estimate_gps.Rd man/estimate_mean_sd_nn.Rd man/estimate_noise_gp.Rd man/estimate_noise_nn.Rd
man/figures/ai/gpcerf_logo.ai
man/figures/png/gpcerf_logo.png
man/figures/png/readme_gp.png
man/figures/png/readme_nngp.png
man/find_optimal_nn.Rd man/generate_synthetic_data.Rd man/get_logger.Rd man/log_system_info.Rd man/plot.cerf_gp.Rd man/plot.cerf_nngp.Rd man/print.cerf_gp.Rd man/print.cerf_nngp.Rd man/set_logger.Rd man/summary.cerf_gp.Rd man/summary.cerf_nngp.Rd
paper/figures/gp_vs_nngp.png
paper/figures/nngp_nnsize.png
paper/figures/readme_gp.png
paper/figures/readme_nngp.png
paper/paper.bib
paper/paper.md
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/code.cpp
tests/testthat.R tests/testthat/test-compute_deriv_nn.R tests/testthat/test-compute_deriv_weights_gp.R tests/testthat/test-compute_inverse.R tests/testthat/test-compute_m_sigma.R tests/testthat/test-compute_posterior_m_nn.R tests/testthat/test-compute_posterior_sd_nn.R tests/testthat/test-compute_rl_deriv_gp.R tests/testthat/test-compute_rl_deriv_nn.R tests/testthat/test-compute_sd_gp.R tests/testthat/test-compute_w_corr.R tests/testthat/test-compute_weight_gp.R tests/testthat/test-estimate_cerf_gp.R tests/testthat/test-estimate_cerf_nngp.R tests/testthat/test-estimate_gps.R tests/testthat/test-estimate_mean_sd_nn.R tests/testthat/test-estimate_noise_gp.R tests/testthat/test-estimate_noise_nn.R tests/testthat/test-find_optimal_nn.R tests/testthat/test-generate_synthetic_data.R tests/testthat/test-set_logger.R
vignettes/.gitignore
vignettes/A-Note-on-Choosing-Hyperparameters.Rmd vignettes/Developers-Guide.Rmd vignettes/GPCERF.Rmd vignettes/Nearest-neighbor-Gaussian-Processes.Rmd vignettes/Standard-Gaussian-Processes.Rmd
boyuren158/GP-CERF documentation built on April 14, 2024, 10:25 a.m.