functional_tests/paper_runs/README.md

In boyuren158/GP-CERF: Gaussian Processes for Estimating Causal Exposure Response Curves

Reproducing Software Paper Examples

Follow these steps to reproduce the software paper examples:

• Step 1: Clone the repo and navigate to the folder.

git clone -b JOSS https://github.com/NSAPH-Software/GPCERF.git
cd GPCERF

• Step 2: Run docker container. In the terminal, run the following:

docker run -it --rm \
        -p 8230:8787 \
        -e USER=rstudio \
        -e PASSWORD=pass \
        -v "/path/to/your/folder/on/host:/home/rstudio/Project" nsaphsoftware/gpcerf_dev:3

• Step 3: Open your browser and go to the following link:

http://localhost:8230/

• Step 4: Log in with the following credentials:

• Username: rstudio

• Password: pass

• Step 5: Load the project and run the examples:

devtools::load_all()
devtools::install()
# and run the examples.

boyuren158/GP-CERF documentation built on April 14, 2024, 10:25 a.m.