bozdaglab/miRDriver
miRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer

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bozdaglab/miRDriver: miRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer
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miRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer

AgetRegionWiseGisticproduce regionwise Gistic files i.e. peak wise files
BgetDifferentiallyExpressedGenesFind Differentially Expressed Genes
CmakingCisAndTransGenesMaking Cis and Trans Genes
DgatherCisGenesGathering of Cis genes for each trans gene
Dorothea_dataDorothea_data
dummy_CNVData10dummy_CNVData10
dummy_methylationData10dummy_methylationData10
dummy_mirnaData10dummy_mirnaData10
Dummy_RnaSeq_Count_DataDummy_RnaSeq_Count_Data
dummy_RSeqData10_200dummy_RSeqData10_200
dummy_TFDatadummy_TFData
EgetTransGenePredictorFileCreation of the trans gene predictor file
FlassoParallelForTransGeneLasso Regression For All Predictors
Genes_coordGenes_coord
mirna_bedfilemirna_bedfile
bozdaglab/miRDriver documentation built on Feb. 1, 2022, 1:11 p.m.

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