Files in brendanf/LSUx
Cut rDNA Sequences Into Domains Using Covariance Models
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/amplicon_extract.R
R/lsux.R
R/util.R
README.Rmd
README.md
codecov.yml
data-raw/itsx_result.R
data/itsx_result.rda
inst/extdata/fungi_32S.cm
inst/extdata/fungi_32S.stk
inst/extdata/fungi_32S_LR5.cm
inst/extdata/fungi_32S_LR5.stk
man/find_amplicon.Rd
man/find_primer.Rd
man/gap_fill.Rd
man/itsx_result.Rd
man/lsux.Rd
man/merge_5_8S.Rd
man/repair_unmatched_secondary_structure.Rd
man/truncate_alignment.Rd
tests/testthat.R
tests/testthat/lsu
tests/testthat/merge.rds
tests/testthat/test-lsux.R
tests/testthat/test-repair_ss.R
tests/testthat/test-sread.R
tests/testthat/test-test_merge_5_8S.R
vignettes/.gitignore
vignettes/LSUx.Rmd
