Man pages for brendanf/LSUx
Cut rDNA Sequences Into Domains Using Covariance Models
| find_amplicon | Find the location of an amplicon in an alignment |
| find_primer | Find the best location for a primer sequence in a gappy... |
| gap_fill | Convert range from ungapped sequence to gapped sequence |
| itsx_result | Sample ITSx results from difficult sequences. |
| lsux | Extract variable/conserved domains from LSU rDNA |
| merge_5_8S | Repair poor 5.8S detection in ITSx results using Infernal... |
| repair_unmatched_secondary_structure | Replaced unmatched brackets in a dot-bracket RNA secondary... |
| truncate_alignment | Truncate an annotated Stockholm alignment file with secondary... |
