Man pages for broadinstitute/inferCNV
Infer Copy Number Variation from Single-Cell RNA-Seq Data

add_to_seuratadd_to_seurat()
annotsGenerated classification for 10 normal cells and 10 tumor...
apply_median_filteringapply_median_filtering
CreateInfercnvObjectCreateInfercnvObject
dataGenerated SmartSeq2 expression data with 10 normal cells and...
filterHighPNormalsfilterHighPNormals: Filter the HMM identified CNV's by the...
genesDownsampled gene coordinates file from GrCh37
HMM_statesinfercnv object result of the processing of run() in the HMM...
inferCNVBayesNetinferCNVBayesNet: Run Bayesian Network Mixture Model To...
infercnv-classThe infercnv Class
infercnv_objinfercnv object result of the processing of run() in the...
infercnv-packageinfercnv: Infer Copy Number Variation from Single-Cell...
MCMC_inferCNV-classMCMC_inferCNV class
mcmc_objinfercnv object result of the processing of inferCNVBayesNet...
plot_cnvPlot the matrix as a heatmap, with cells as rows and genes as...
plot_per_groupplot_per_group
runrun() : Invokes a routine inferCNV analysis to Infer CNV...
sample_objectsample_object
validate_infercnv_objvalidate_infercnv_obj()
broadinstitute/inferCNV documentation built on Nov. 12, 2019, 2:28 p.m.