load.all.datafiles.from.taiga: Function to retrieve all the data available in a specific...

In broadinstitute/taigr: Load taiga data with cache functionality

Function to retrieve all the data available in a specific datasetVersion

Description

Function to retrieve all the data available in a specific datasetVersion

Usage

load.all.datafiles.from.taiga(datasetVersion.id = NULL, dataset.name = NULL,
  dataset.version = NULL, transpose = FALSE, cache.dir = "~/.taiga",
  force.taiga = FALSE, taiga.url = getOption("default.taiga.url",
  "https://cds.team/taiga"), cache.id = FALSE, no.save = FALSE,
  taiga.api.version = getOption("default.taiga.api.version", 2),
  force.convert = F)

Arguments

datasetVersion.id	DatasetVersion id
dataset.name	Permaname of the dataset we want to retrieve data from
dataset.version	Version of the dataset
transpose	Will transpose all the matrices
cache.dir	Path to the directory where to put your data in. !Not recommended to modify this
force.taiga	Boolean to force the download of the data from Taiga instead of using the cache (if you modified the data for example)
taiga.url	Url to taiga. !Not recommended to change this
cache.id	Id of the cache used to store the file
no.save	Boolean to not put the file in cache
taiga.api.version	Version of the Taiga api to use. !Not receommended to change this
force.convert	Boolean to force a new conversion of the data. Might be useful if the conversion has been interrupted

Value

Hash table of the form 'filename': 'data'

broadinstitute/taigr documentation built on March 5, 2024, 2:27 p.m.