API for btmartin721/ClineHelpR
Parses and Plots BGC and INTROGRESS Output
| Global functions | |
|---|---|
| alphaBetaPlot | Man page Source code |
| bind_bgc_runs | Source code |
| check_if_files | Source code |
| clean_sort_pafscaff | Source code |
| clinesXenvironment | Man page Source code |
| combine_bgc_output | Man page Source code |
| countBGCruns | Source code |
| discardNsamples | Source code |
| extractPointValues | Man page Source code |
| filter_missingByInd | Source code Source code |
| filter_missingByLoc | Source code Source code |
| filter_overhang | Source code |
| filter_randomSubsetLoci | Source code Source code |
| genind2bgc | Man page Source code |
| genind2introgress | Man page Source code |
| getCounts | Source code |
| getRefAlt | Source code |
| get_ab_outliers | Source code |
| get_bgc_outliers | Man page Source code |
| get_cis | Source code |
| get_hi | Source code |
| get_phi_ih | Source code |
| hiXenvCorr | Source code |
| join_bgc_gff | Man page Source code |
| parseGFF | Man page Source code |
| partition_raster_bg | Man page Source code |
| phiPlot | Man page Source code |
| plotBGCparams | Source code |
| plotLnL | Source code |
| plot_lm_clines | Source code |
| plot_lm_hindex | Source code |
| plot_outlier_ideogram | Man page Source code |
| plot_partitions | Source code |
| plot_traces | Man page Source code |
| prepare_rasters | Man page Source code |
| range01 | Source code Source code |
| read_gff | Source code |
| runENMeval | Man page Source code |
| runIntrogress | Man page Source code |
| subsetIndividuals | Man page Source code |
| summarize_ENMeval | Man page Source code |
| thin_MCMC | Source code |
