sitereport: Site reporting summary

In btorobrob/cesr: Trend analysis of Constant Effort Site ringing data

Site reporting summary

Description

Generate a simple summary report (as MS Word documents) of captures at a site.

Usage

  sitereport(cesdata, sitelist=NULL, year=0, template_file=NULL, outdir=getwd(), no.species=12, nyears=NA, verbose=TRUE)

Arguments

cesdata	a dataframe generated by readces
sitelist	character, a vector of sitenames for which to generate the reports; NULL and "all" are equivalent
year	specify a year to create a summary by species
template_file	the name of an RMarkdown template file
outdir	where to save the reports to
nyears	numeric, limit the number of years plotted to the number that the site operated, with this as a minimum. For example, if nyears=10 and the site has operated for 15 years, 15 bars (and dots) will be shown, but if the site has only operated for 5 years, then 10 bars will be plotted.
no.species	numeric, maximum number of species to include in the barplots.
verbose	logical, print a message when each site has been processed?

Author(s)

Rob Robinson

Examples

## Not run: 
data(ukdata)
  sitereport(ukdata, sitelist=c('656','420'))

## End(Not run)

btorobrob/cesr documentation built on June 9, 2025, 5:39 a.m.