README.md

In burgerga/CPTrackRApp: CPTrackR App

CPTrackRApp

Overview

The goal of CPTrackRApp is to fix track identifiers from CellProfiler’s sqlite output. CPTrackRApp is a Shiny app that analyses the sqlite file, and determines the parameters for CPTrackR to fix the track. Additionally it shows the CellProfiler pipeline metadata, and previews the fixed tracks.

Installation

You can install the development version of CPTrackRApp from with:

# install.packages("remotes")
remotes::install_github("burgerga/CPTrackRApp")

Usage

To start the app use

CPTrackRApp::run_app()

Screenshot:

burgerga/CPTrackRApp documentation built on Jan. 15, 2024, 3:53 a.m.