Description Usage Arguments Details Value Examples
Uses package feather to convert R object created in R/qtl2 for fast access.
1 | feather2calc_genoprob(object)
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object |
Object of class |
The genotype probabilities are extracted from 1-2 feather databases. Each chromosome is extracted in turn.
An object of class calc_genoprob
.
1 2 3 4 5 6 7 | library(qtl2)
grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2"))
map <- insert_pseudomarkers(grav2$gmap, step=1)
probs <- calc_genoprob(grav2, map, error_prob=0.002)
dir <- tempdir()
fprobs <- feather_genoprob(probs, "grav2", dir)
nprobs <- feather2calc_genoprob(fprobs)
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