Man pages for byandell/qtl2ggplot
Data Visualization for QTL Experiments
| color_patterns_get | Set up col, pattern and group for plotting. |
| color_patterns_pheno | Set up col, pattern, shape and group for plotting. |
| color_patterns_set | Set up colors for patterns or points |
| ggplot_coef | Plot QTL effects along chromosome |
| ggplot_genes | Plot gene locations for a genomic interval |
| ggplot_genes_internal | GGPlot internal routine for ggplot_genes |
| ggplot_listof_scan1coef | Plot of object of class listof_scan1coeff |
| ggplot_onegeno | Plot one individual's genome-wide genotypes |
| ggplot_peaks | Plot QTL peak locations |
| ggplot_pxg | Plot phenotype vs genotype |
| ggplot_scan1 | Plot a genome scan |
| ggplot_snpasso | Plot SNP associations |
| listof_scan1coef | List of scan1coef objects |
| sdp_to_pattern | Convert sdp to pattern |
| summary_scan1 | Summary of scan1 object |
