Files in byandell/qtl2shiny

Shiny interface for 'qtl2' Fine Mapping

R/alleleServer.R R/allele_scan.R R/chr_pos.R R/collapse_covar.R R/dashServer.R R/diploServer.R R/ensembl_gene.R R/geneExonServer.R R/geneRegionServer.R R/gene_exons.R R/gene_region.R R/get_genes.R R/haploServer.R R/helpPopup.R R/hotspot.R R/hotspotServer.R R/hotspot_wrap.R R/mainApp.R R/mediateServer.R R/modify_object.R R/num_pheno.R R/patternServer.R R/peakDataTable.R R/peaksServer.R R/peaks_in_pos.R R/phenoPlotServer.R R/phenoServer.R R/pheno_read.R R/plot_eff.R R/plot_gene_exons.R R/plot_gene_region.R R/plot_hot.R R/plot_null.R R/plot_scan.R R/plot_sex.R R/probsServer.R R/projectServer.R R/read_project.R R/read_query_rds.R R/scan1_effect.R R/scan1_pattern.R R/scanCoefServer.R R/scan_pat_type.R R/select_phenames.R R/select_range.R R/set_analyses.R R/setupServer.R R/snpFeatureServer.R R/snpGeneServer.R R/snpPatternServer.R R/snpPlotServer.R R/snpSetupServer.R R/snpSumServer.R R/summary_hot.R R/summary_na.R R/topSNPs.R R/top_pat_plot.R R/top_snp_asso.R R/triadServer.R R/versions.R README.md inst/qtl2shinyApp/about-extended.md inst/qtl2shinyApp/about.md inst/qtl2shinyApp/app.R inst/rsconnect/app.R inst/scripts/ShiningLightMagic.Rmd inst/scripts/ShinyCompress.Rmd inst/scripts/ShinyLogic.Rmd inst/scripts/ShinyLogicFlow.R inst/scripts/diplo_calc.R inst/scripts/doqtl2.md inst/scripts/network_igraph.Rmd inst/scripts/qtl2dag.Rmd inst/scripts/qtl2shiny_index.Rmd inst/scripts/query_project.R inst/scripts/query_project_v1.R inst/scripts/query_taxa.R inst/scripts/query_taxa_v1.R inst/tests/peaks.R inst/tests/phenos.R inst/tests/scans.R inst/tests/testPhenos.R inst/tests/tests_shinyPhenos.R inst/tests/window.R man/alleleServer.Rd man/dashServer.Rd man/diploServer.Rd man/geneExonServer.Rd man/geneRegionServer.Rd man/get_genes.Rd man/haploServer.Rd man/helpPopup.Rd man/hotspot.Rd man/hotspotServer.Rd man/mainApp.Rd man/mediateServer.Rd man/patternServer.Rd man/peaksServer.Rd man/phenoPlotServer.Rd man/phenoServer.Rd man/probsServer.Rd man/projectServer.Rd man/read_project.Rd man/read_query_rds.Rd man/scanCoefServer.Rd man/setupServer.Rd man/snpFeatureServer.Rd man/snpGeneServer.Rd man/snpPatternServer.Rd man/snpPlotServer.Rd man/snpSetupServer.Rd man/snpSumServer.Rd man/triadServer.Rd vignettes/DeveloperGuide.Rmd vignettes/UserGuide.Rmd vignettes/qtl2shinyData.Rmd