Files in byandell/qtlhot

Inference for QTL Hotspots

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/add.phenos.R R/big.R R/cmst.R R/highlod.R R/hotperm.R R/hotsize.R R/max.R R/multiple_testing_sim_functions.R R/neqtl.R R/parallel.R R/plotcmst.R R/ravel.R R/roc.R R/rug.R R/runningmean.R R/simcmst.R R/simhot.R R/sliding.R R/study.R R/utilcmst.R R/utilhot.R R/westwu.R

README

data/CMSTCross.RData

data/hotperm1.RData

inst/deprecated.R

inst/notes/cmst.txt

inst/notes/code.txt

inst/notes/perm.txt

inst/notes/plot.R

inst/notes/vignette.txt

inst/parallel/Phase0.R inst/parallel/Phase1.R inst/parallel/Phase2.R inst/parallel/Phase3.R

inst/parallel/ReadMe

inst/parallel/SOAR.phase0.R inst/parallel/SOAR.post.R

inst/parallel/cross.RData

inst/parallel/params.txt

inst/parallel/runparallel.sh

man/CMSTtests.Rd man/GetCandReg.Rd man/GetCommonQtls.Rd man/PrecTpFpMatrix.Rd man/SimCrossCausal.Rd man/add.phenos.Rd man/filter.threshold.Rd man/highlod.Rd man/hotperm.Rd man/hotsize.Rd man/parallel.qtlhot.Rd man/sim.hotspot.Rd man/westwu.Rd

src/Makevars

src/qtlhot.so

src/register.c

src/runningmean.c

src/runningmean.h

vignettes/cmst.Rnw

vignettes/cmst.pdf

vignettes/qtlhot.Rnw

vignettes/qtlhot.pdf

vignettes/savedperms.RData

byandell/qtlhot documentation built on March 7, 2020, 3:25 p.m.