byandell/qtlnet: Causal Inference of QTL Networks

Functions to Simultaneously Infer Causal Graphs and Genetic Architecture. Includes acyclic and cyclic graphs for data from an experimental cross with a modest number (<10) of phenotypes driven by a few genetic loci (QTL). Chaibub Neto E, Keller MP, Attie AD, Yandell BS (2010) Causal Graphical Models in Systems Genetics: a unified framework for joint inference of causal network and genetic architecture for correlated phenotypes. Annals of Applied Statistics 4: 320-339. <doi:10.1214/09-AOAS288>.

Getting started

Package details

AuthorElias Chaibub Neto <echaibub@hotmail.com> and Brian S. yandell <brian.yandell@wisc.edu>
MaintainerBrian S. Yandell <brian.yandell@wisc.edu>
LicenseGPL (>= 2)
Version1.5.2
URL http://www.stat.wisc.edu/~yandell/sysgen
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("byandell/qtlnet")
byandell/qtlnet documentation built on April 1, 2020, 7:17 p.m.