gg_env_plot: gg_env_plot

In c5sire/fbmet: Provides convenience Tools for Analysis of Multi-environmental Field Trials

Description

Shows performance of a trait or index for all varties separately in each environment. Data for each environment are displayed as violin plots.

Usage

gg_env_plot(atable, genotypes = unique(as.character(atable$Genotype))[1:10],
  trait = names(atable)[ncol(atable)])

Arguments

atable	a dataframe containing at least three columns: Genotype, Locality, [Trait] in this order.
genotypes	a subset of up to 10 genotypes that will be highlighted through lines.
trait	the trait (or index) to be shown

Details

One or more (up to 10) genotypes can be highlighted, that is they will be displayed in differntly colored dots and are connected through lines which are also correspondingly colored.

Examples

# Get sample data
library(agricolae)
data(plrv)

library(fbmet)

# enable easy summaries
#library(magrittr)
library(dplyr)

atable <- plrv %>% group_by(Genotype, Locality) %>% summarise(Yield = mean(Yield))

if(interactive()){
  gg_env_plot(atable)
}

c5sire/fbmet documentation built on May 13, 2019, 10:34 a.m.