API for c7rishi/hidgenclassifier
Functions for Bayesian hierarchical hidden genome classifier
| Global functions | |
|---|---|
| %>% | Man page |
| .log_exp_shift_sum_rest_cols | Source code |
| .log_exp_shift_sum_rest_cols_safe | Source code |
| .log_sum_exp | Source code |
| Cpp_calc_minfo | Source code |
| adjust_Xnew | Man page Source code |
| as.data.frame | Source code |
| calc_dist_pair | Source code |
| calc_dist_refvec_targetmat | Source code |
| calc_lpd_smlc | Source code |
| calc_minfo | Man page Source code |
| calc_one_v_rest_auc | Man page Source code |
| create_model | Man page Source code |
| divide_cols | Man page Source code |
| divide_rows | Man page Source code |
| extract_cancer_response | Man page Source code |
| extract_design | Man page Source code |
| extract_design_mdesign_mcat | Man page Source code |
| extract_design_mdesign_mcts | Man page Source code |
| extract_design_mdesign_sbs96 | Man page Source code |
| extract_glmnet | Man page Source code |
| extract_tmb | Man page Source code |
| fill_sparsemat_zero | Source code |
| fit_mlogit | Man page |
| fit_nn | Man page |
| fit_nnc | Man page Source code |
| fit_perturbed_smlc | Source code |
| fit_rf | Man page |
| fit_rfc | Man page Source code |
| fit_smlc | Man page Source code |
| fit_svm | Man page |
| fit_svmc | Man page Source code |
| fitness | Man page Source code |
| get_rand_foldid | Source code Source code |
| impact | Man page |
| indiv_predict_effect | Man page |
| new_nn | Man page Source code |
| odds_ratio_mlogit | Man page Source code |
| odds_ratio_smlc | Man page |
| optimal_threshold | Man page |
| predict_mlogit | Man page |
| predict_nn | Man page |
| predict_nnc | Man page Source code |
| predict_rf | Man page |
| predict_rfc | Man page Source code |
| predict_smlc | Man page Source code |
| predict_svm | Man page |
| predict_svmc | Man page |
| predict_wo_feature | Source code |
| print_single | Source code |
| screen_variant_mi | Man page Source code |
| softmax | Source code |
| tcga | Man page |
| tune_model | Man page Source code |
| variant_screen_mi | Man page |
