HypoxiaScore: Creates consesus hypoxia score from published gene expression...

In caanene1/Decosus: Method to generate robust consensus from published cell deconvolution/aggregation methods

Creates consesus hypoxia score from published gene expression signatures.

Description

Function to consolidate seven hypoxia signatures.

Usage

HypoxiaScore(x = df)

Arguments

x	The data frame with samples in column/names and rows as genes.

Details

A Consesus approache to hypoxia score using seven published gene expression signatures. This generates robust estimate of hypoxia.

Value

Columns of hypoxia score for each signature and column HS for consesus

result

Table of hypoxia score and consesus values

Author(s)

Chinedu A. Anene, PhD

References

Depends on: Buffa et al 2010 Winter et al 2007 Ragnum et al., 2015 Eustace et al., 2013 Sorensen et al., 2010 Elvidge et al., 2006 Hu et al., 2009 Uses base R functions.

caanene1/Decosus documentation built on Nov. 18, 2024, 7:38 p.m.