prepareIsoformDatabase: prepareIsoformDatabase Create a reference database of all...
In cag1343/LORD: Long-read Analysis of transcription Termination Estimation and Recognition
View source: R/isoform_links_database-helper.R
prepareIsoformDatabase R Documentation
prepareIsoformDatabase
Create a reference database of all TSS-TES link associations based on annotation
Description
prepareIsoformDatabase
Create a reference database of all TSS-TES link associations based on annotation
Usage
prepareIsoformDatabase(annotation, tss.window, tes.window)
Arguments
annotation
reference annotation GenomicRanges object
tss.window
window to consider distinct TSS
tes.window
window to consider distinct TESassemblies
Value
promoterDatabase with classification of links
cag1343/LORD documentation built on Dec. 11, 2024, 12:50 a.m.
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View source: R/isoform_links_database-helper.R
| prepareIsoformDatabase | R Documentation |
prepareIsoformDatabase Create a reference database of all TSS-TES link associations based on annotation
Description
prepareIsoformDatabase Create a reference database of all TSS-TES link associations based on annotation
Usage
prepareIsoformDatabase(annotation, tss.window, tes.window)
Arguments
annotation |
reference annotation GenomicRanges object |
tss.window |
window to consider distinct TSS |
tes.window |
window to consider distinct TESassemblies |
Value
promoterDatabase with classification of links
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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