tests/testthat/_snaps/design.md

In calico/romic: R for High-Dimensional Omic Data

extract design as a table

Code
  .
Output
  # A tibble: 10 x 3
     variable        type                table       
     <chr>           <chr>               <chr>       
   1 name            feature_primary_key features    
   2 systematic_name character           features    
   3 BP              character           features    
   4 MF              character           features    
   5 sample          sample_primary_key  samples     
   6 nutrient        character           samples     
   7 DR              numeric             samples     
   8 name            feature_primary_key measurements
   9 sample          sample_primary_key  measurements
  10 expression      numeric             measurements

Catch malformed design objects

Code
  check_design(malformed_design)
Condition
  Error in `check_design()`:
  ! The following unexpected attributes were found in the design: foo

Code
  check_design(malformed_design)
Condition
  Error in `check_design()`:
  ! The following attributes were missing in the design: feature_pk

calico/romic documentation built on Sept. 27, 2024, 7:16 p.m.