CHANGELOG.md

In campanam/rCorrSieve: Software for Summarising and Evaluating STRUCTURE Output

rCorrSieve Change Log

Michael G. Campana, 2019-2022 Smithsonian's National Zoo & Conservation Biology Institute Contact: [e-mail]

Public domain rCorrSieve GitHub documentation updates (version = 1.6-8) are US government works. Unmodified CorrSieve source code (versions <= 1.6-8) copyright (c) Michael G. Campana, 2010-2013

Version 1.6-9

CRAN Metadata update

Version 1.6-8 (GitHub 2019)

Updated documentation and licensing for GitHub hosting

Version 1.6-8

CRAN Metadata update

Version 1.6-7

CRAN Metadata update

Version 1.6-6

Fixed a bug in calc.delta that prevented calculations when K = 1 was not included.

Version 1.6-5

Added compatibility with INSTRUCT output. Fixed bug in which read.struct assumed the presence of FST values, even in non-admixture model runs. Fixed bug in the FST optimisation procedure using ordering of FST values. Improved algorithm for FST optimisation using Q-matrix correlations.

Version 1.6-4

Corrected bug which prevented rows-and-columns Q-matrix correlations from being calculated when only two runs were completed per K. Corrected bug which prevented the performance of Q-matrix correlations when the number of runs per K varied between K values or where the minimum tested K value was not 1. Corrected bug which prevented the calculation of the average maximum correlation when the number of runs for individual K values was 0.

Version 1.6-3

Corrected minor bug in testing algorithm for continuous data Corrected minor bug in setting default file location Documentation corrections

Version 1.6-2

Added 2 methods to optimise the standard deviation calculation.

Version 1.6-1

Translated original Ruby program to R.

Versions < 1.6-1

Only available in Ruby implementation (rubyCorrSieve)

campanam/rCorrSieve documentation built on May 7, 2022, 6:26 a.m.