README.md
In caravagn/TIN: TINC - Tumour-in-Normal contamination
TINC 
TINC is a package to determine the contamination of bulk samples, from
read counts data.
Precisely, the package provides methods to determine, for every matched
pair of normal and tumour biopsies, the proportion of cancer cells in
the normal sample (Tumour in Normal), and the proportion of cancer cells
in the tumour sample (Tumour in Tumour).
TINC is part of the evoverse set of R
packages to implement Cancer
Evolution
analyses.
Help and support
Installation
You can install the released version of TINC from
GitHub with:
# install.packages("devtools")
devtools::install_github("caravagn/TINC")
Copyright and contacts
Giulio Caravagna, PhD. Institute of Cancer Research, London,
UK.
caravagn/TIN documentation built on Dec. 10, 2019, 11:21 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
TINC
TINC is a package to determine the contamination of bulk samples, from
read counts data.
Precisely, the package provides methods to determine, for every matched pair of normal and tumour biopsies, the proportion of cancer cells in the normal sample (Tumour in Normal), and the proportion of cancer cells in the tumour sample (Tumour in Tumour).
TINC is part of the evoverse set of R
packages to implement Cancer
Evolution
analyses.
Help and support
Installation
You can install the released version of TINC from
GitHub with:
# install.packages("devtools")
devtools::install_github("caravagn/TINC")
Copyright and contacts
Giulio Caravagna, PhD. Institute of Cancer Research, London, UK.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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