caravagnalab/LineaGT: lineaGT

This package provides algorithms for multi-lineage inference from vector integration sites and somatic mutations during gene therapy. The package acts as an interface, implemented through reticulate, to the pyLineaGT Python package that provides the main inference algorithms; this package also provides visualisation and data input/output functions.

Getting started

Package details

AuthorElena Buscaroli
MaintainerElena Buscaroli <ele.buscaroli@gmail.com>
LicenseGNU
Version0.1.0
URL https://github.com/caravagnalab/lineaGT https://caravagnalab.github.io/lineaGT/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("caravagnalab/LineaGT")
caravagnalab/LineaGT documentation built on June 13, 2025, 1:58 p.m.