API for carinelegrand/RiboVIEW
Visualization, Quality and Statistics for Ribosome Profiling
| Global functions | |
|---|---|
| .AA_NAMESPACE_CL | Source code |
| .DNA_NAMESPACE_CL | Source code |
| .RNA_NAMESPACE_CL | Source code |
| BCO.norm | Source code |
| CLbits_method_pfm | Source code |
| CLcalculate.overlap.and.pvalue | Source code |
| CLcomputeBits | Source code |
| CLfindNamespace | Source code |
| CLgeom_logo_pfm | Source code |
| CLget_col_scheme | Source code |
| CLget_font | Source code |
| CLggseqlogo_pfm | Source code |
| CLguessSeqType | Source code |
| CLletterMatrix | Source code |
| CLlist_col_schemes | Source code |
| CLlist_fonts | Source code |
| CLlogo_data_pfm | Source code |
| CLmakePFM | Source code |
| CLmake_col_scheme | Source code |
| CLmatrix_to_heights | Source code |
| CLnewRange | Source code |
| CLprobability_method_pfm | Source code |
| CLtheme_logo | Source code |
| CLvenn.diagram | Source code |
| RiboVIEW | Man page |
| RiboVIEW-package | Man page |
| TracyWidom | Source code |
| Venn.all | Man page Source code |
| batch.effects.lm.e | Man page Source code |
| batch.effects.pca | Man page Source code |
| chx.artefacts | Man page Source code |
| col2trspcol | Source code |
| covA | Source code |
| enrichmentNoccupancy | Man page Source code |
| enricht.aroundA | Man page Source code |
| exploitfitrob | Source code |
| generate.m.s | Man page Source code |
| gtf2table | Man page Source code |
| map.triNt.2.Codon | Source code |
| metagene.all | Man page Source code |
| metageneExpl | Source code |
| ntcodon.freq.cod | Man page Source code |
| ntcodon.freq.cod.single | Source code |
| ntcodon.freq.nt | Man page Source code |
| ntcodon.freq.nt.single | Source code |
| occupancyNwaveParallel_one | Source code |
| outputMine | Man page Source code |
| outputQc | Man page Source code |
| periodicity | Man page Source code |
| periodicity_one | Source code |
| periodicity_plot | Source code |
| permut.pca.mat | Source code |
| read.pytable | Source code |
| repl.correl.codon | Man page Source code |
| repl.correl.codon.singleres | Source code |
| repl.correl.counts.Venn | Man page Source code |
| repl.correl.gene | Man page Source code |
| repl.correl.heatmap | Man page Source code |
| select.FPlen | Man page Source code |
| unionMat | Source code |
| visu.m.s.enrichmnt | Man page Source code |
| visu.tracks | Man page Source code |
