getData: getData
In carjed/smaug: Helper functions for the SMAUG pipeline
Description
Usage
Arguments
Value
Author(s)
Examples
Description
getData
prepare input data for downstream processing
Usage
1
getData(summfile, singfile, bindir)
Arguments
summfile
input file containing list of sites
singfile
file containing sites annotated with sample ID
bindir
directory containing the motif counts
Value
a list of four components: sites, bins, mct, & aggseq
Author(s)
Jed Carlson
Examples
1
getdata("sites.txt", "sites_id.txt", "/path/to/motif_counts")
carjed/smaug documentation built on May 5, 2019, 3:49 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
getData prepare input data for downstream processing
Usage
1 | getData(summfile, singfile, bindir)
|
Arguments
summfile |
input file containing list of sites |
singfile |
file containing sites annotated with sample ID |
bindir |
directory containing the motif counts |
Value
a list of four components: sites, bins, mct, & aggseq
Author(s)
Jed Carlson
Examples
1 | getdata("sites.txt", "sites_id.txt", "/path/to/motif_counts")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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