coexpressionNetworkFixed: Co-expression network with fixed cluster sizes
In carmen-maria-hernandez/coexnetwork: Development of supervidsed co-expression networks
Description
Usage
Arguments
Value
Description
Calculate a coexpression network using the genes selected by the glmnet algorithm
as the best predictors of a covariate.
Usage
1
coexpressionNetworkFixed(data, genes, tam)
Arguments
data
expression matrix
genes
dataframe with the genes selected by the glmnet algorithm and their coefficients
tam
number: indicates the number of genes in each cluster
Value
A dataframe where for each gene selected by glmnet appears the tam genes most correlated with it and that correlation
carmen-maria-hernandez/coexnetwork documentation built on Dec. 19, 2021, 1:53 p.m.
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Description Usage Arguments Value
Description
Calculate a coexpression network using the genes selected by the glmnet algorithm as the best predictors of a covariate.
Usage
1 | coexpressionNetworkFixed(data, genes, tam)
|
Arguments
data |
expression matrix |
genes |
dataframe with the genes selected by the glmnet algorithm and their coefficients |
tam |
number: indicates the number of genes in each cluster |
Value
A dataframe where for each gene selected by glmnet appears the tam genes most correlated with it and that correlation
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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