batchCorrection | Batch-correction for CyTOF data |
clusterAnnotation | Integration of manual cluster annotations |
clustering | Clustering |
clusterPropagation | Batch-wise propagation of clusters through machine learning |
downsampleSCE | Down-sampling an SCE object |
iMUBAC | iMUBAC: Integration of Multi-Batch Cytometry datasets. |
plotClusterHeatmap | Plot cluster heatmap |
plotDR | Plot reduced dimensions |
prepSCE | Batch-wise preprocessing of CyTOF FCS files |
runUMAP | Perform dimension reduction through UMAP |
updateMetadataSCE | Updating metadata of an SCE object |
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