cashoes/sear: Simple (effin') enrichment analysis in R

A package for simple enrichment analysis using: 1.MSigDB: Subramanian, Aravind, et al. "Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles." Proceedings of the National Academy of Sciences of the United States of America 102.43 (2005): 15545-15550. 2.Blood Transciptome Modules (BTM): Li, Shuzhao, et al. "Molecular signatures of antibody responses derived from a systems biology study of five human vaccines." Nature immunology 15.2 (2014): 195-204 3.Tissue Enrichment: Benita, Yair, et al. "Gene enrichment profiles reveal T-cell development, differentiation, and lineage-specific transcription factors including ZBTB25 as a novel NF-AT repressor." Blood 115.26 (2010): 5376-5384.

Getting started

Package details

Maintainer
LicenseGPL-3 | file LICENSE
Version0.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("cashoes/sear")
cashoes/sear documentation built on June 4, 2017, 8:58 a.m.