Man pages for cayek/BenchmarkingR
| bench | Create a new benchmarkingR project dirrectory if the... |
| bench.adddataset | add a data set to BenchmarkingR project |
| bench.adddataviewer | result viewer |
| bench.addmethod | add method to BenchmarkingR project |
| bench.addparameter | add parameter setting for data.name and method.name |
| bench.addsampler | add sampler to BenchmarkingR project |
| bench.comparaisonviewer | Comparaison viewer |
| bench.dataviewer | data viewer |
| bench.getdata | Getter a dataset |
| bench.getdata.exploration | Getter a data.exploration |
| bench.getmethod | Getter a method |
| bench.getparam | Getter of parameters of a run |
| bench.getresult | Getter of result of a run |
| bench.heatmap | Compute a heatmap of cerrelation between methods pvalue |
| bench.manhanttanplot | manhattan plot |
| bench.pca | Compute PCA |
| bench.plotfdr_power | Plot fdr and power of method for this data.name. Use B-H... |
| bench.plotres | plot all res of the computation |
| bench.remove | remove specified already computed benchmark |
| bench.removedataset | remove dataset |
| bench.removemethod | remove method |
| bench.removesampler | remove sampler |
| bench.resultviewer | result viewer |
| bench.run | run bencmarking |
| bench.runsampler | add sampler to BenchmarkingR project |
| bench.samplerviewer | run sampler viewer |
| bench.save | save the benchmarcking project |
| bench.snmf | Compute sNMF |
