agg_otus | Aggregate OTU data by another taxonomic level. |
cbmbtools | cbmbtools: General purpose package containing functions and... |
chunkify | Generate R Markdown code chunks. |
export_norm_tax | Write metadata and normalized OTU data (trimmed) to a file.... |
join_tax | Join a dataframe with a taxonomy table. |
list_paired_fastq | Generate a list of paired fastq files from given directory. |
load_shared | Reads in a file containing OTU count data and keeps OTUs... |
load_tax | Reads in a file containing taxonomy data and performs basic... |
make_hel_pca | Create hellinger transformed data and PCA model from... |
many_rf | Generate a list of randomForest models. |
paste_tax | Paste Genus information onto a vector of OTU numbers. |
plot_many_rf_varimp | Using a list of random forest models, create ordered boxplots... |
plot_ra | Create an ordered relative abundance plot |
plot_spider | Create an ordination with spiders based on 'spider_vec' and... |
rank_tax | Generate a ranked vector of OTUs or other taxonomic level. |
taxon_sort_gather | Transform data from wide to long, join a taxonomic level,... |
tsg_ind | Transform data from wide to long, without aggregating... |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.