graph-methods: Getter for graph used for network diffusion
In cbg-ethz/knockdown: Statistical Analysis of High-Throughput Genetic Perturbation Screens
Description
Usage
Arguments
Value
Examples
Description
Returns the graph that has been used for analysis using network
diffusion.
Usage
1
2
3
4
Arguments
obj
the object for which you want to extract the underlying graph
Value
returns a igraph object
Examples
1
2
3
4
5
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8
data(rnaiscreen)
ft <- hm(rnaiscreen)
gr <- readRDS(system.file(
"extdata", "graph_small.rds", package = "perturbatr"))
diffu <- diffuse(ft, gr, r=1)
graph(diffu)
cbg-ethz/knockdown documentation built on Feb. 11, 2020, 6:25 p.m.
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Description Usage Arguments Value Examples
Description
Returns the graph that has been used for analysis using network diffusion.
Usage
1 2 3 4 |
Arguments
obj |
the object for which you want to extract the underlying graph |
Value
returns a igraph object
Examples
1 2 3 4 5 6 7 8 | data(rnaiscreen)
ft <- hm(rnaiscreen)
gr <- readRDS(system.file(
"extdata", "graph_small.rds", package = "perturbatr"))
diffu <- diffuse(ft, gr, r=1)
graph(diffu)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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