Man pages for cbg-ethz/netprioR
A model for network-based prioritisation of genes
| bandwidth | bandwidth |
| cmn | Class Mass Normalization (CMN) from Zhu et al., 2003 |
| conjugate_gradient | Conjugate Gradient Solver |
| cuthill_mckee | Cuthill McKee (CM) algorithm |
| fit-methods | Fit 'netprioR' model |
| laplacian | Graph Laplacian |
| learn | Fit netprioR model |
| netprioR-class | netprioR |
| netprioR-package | Package: netprioR |
| norm_kern | Normalise kernel |
| plot.netprioR | Plot method for 'netprioR' objects |
| ranks-methods | Retrieve ranked prioritisation list |
| roccurve | Compute ROC curves from predicted and true labels |
| ROC-methods | Compute ROC curve from netprioR model and true labels |
| simulate_labels | Simulate labels |
| simulate_network_random | Simulate random networks with predefined number of members... |
| simulate_network_scalefree | Simulate scalefree networks |
| simulate_phenotype | Simulate phenotypes correlated to labels pivoted into two... |
| simulation | Example data: Simulated networks, phenotypes and labels for N... |
| weights-methods | Retrieve network weights |
