cbielow/PTXQC: Quality Report Generation for MaxQuant and mzTab Results
Generates Proteomics (PTX) quality control (QC) reports for shotgun LC-MS data analyzed with the MaxQuant software suite (from .txt files) or mzTab files (ideally from OpenMS 'QualityControl' tool). Reports are customizable (target thresholds, subsetting) and available in HTML or PDF format. Published in J. Proteome Res., Proteomics Quality Control: Quality Control Software for MaxQuant Results (2015) <doi:10.1021/acs.jproteome.5b00780>.
Getting started
Browse package contents
Package details |
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| Author | Chris Bielow [aut, cre], Juliane Schmachtenberg [ctb], Swenja Wagner [ctb], Patricia Scheil [ctb], Tom Waschischek [ctb], Guido Mastrobuoni [dtc, rev] |
| Maintainer | Chris Bielow <chris.bielow@bsc.fu-berlin.de> |
| License | BSD_3_clause + file LICENSE |
| Version | 1.1.1 |
| URL | https://github.com/cbielow/PTXQC |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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